WL94_13690 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

Your Input:

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Score

WL94_13690

annotation not available (178 aa)

Predicted Functional Partners:

ccsB

0.685

WL94_15710

0.666

WL94_13695

0.635

WL94_13805

0.598

WL94_15690

0.596

WI67_12145

0.587

WI67_15160

0.586

WL94_17200

0.562

DM42_7052

0.561

WI67_15175

0.490

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_7052	WI67_15160	DM42_7052	DM42_2233	coxB- cytochrome c oxidase, subunit II	annotation not available	0.529
DM42_7052	WI67_15175	DM42_7052	DM42_2230	coxB- cytochrome c oxidase, subunit II	annotation not available	0.529
DM42_7052	WL94_13690	DM42_7052	DM42_2199	coxB- cytochrome c oxidase, subunit II	annotation not available	0.561
DM42_7052	WL94_13805	DM42_7052	DM42_2222	coxB- cytochrome c oxidase, subunit II	Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	0.926
DM42_7052	WL94_17200	DM42_7052	DM42_566	coxB- cytochrome c oxidase, subunit II	annotation not available	0.545
WI67_12145	WL94_13690	DM42_2827	DM42_2199	Uncharacterized protein	annotation not available	0.587
WI67_12145	WL94_15710	DM42_2827	DM42_1440	Uncharacterized protein	annotation not available	0.783
WI67_12145	ccsB	DM42_2827	DM42_1439	Uncharacterized protein	cytochr_II_ccsB- cytochrome c-type biogenesis protein CcsB	0.777
WI67_15160	DM42_7052	DM42_2233	DM42_7052	annotation not available	coxB- cytochrome c oxidase, subunit II	0.529
WI67_15160	WI67_15175	DM42_2233	DM42_2230	annotation not available	annotation not available	0.832
WI67_15160	WL94_13690	DM42_2233	DM42_2199	annotation not available	annotation not available	0.586
WI67_15160	WL94_13805	DM42_2233	DM42_2222	annotation not available	Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	0.589
WI67_15175	DM42_7052	DM42_2230	DM42_7052	annotation not available	coxB- cytochrome c oxidase, subunit II	0.529
WI67_15175	WI67_15160	DM42_2230	DM42_2233	annotation not available	annotation not available	0.832
WI67_15175	WL94_13690	DM42_2230	DM42_2199	annotation not available	annotation not available	0.490
WI67_15175	WL94_13805	DM42_2230	DM42_2222	annotation not available	Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	0.832
WL94_13690	DM42_7052	DM42_2199	DM42_7052	annotation not available	coxB- cytochrome c oxidase, subunit II	0.561
WL94_13690	WI67_12145	DM42_2199	DM42_2827	annotation not available	Uncharacterized protein	0.587
WL94_13690	WI67_15160	DM42_2199	DM42_2233	annotation not available	annotation not available	0.586
WL94_13690	WI67_15175	DM42_2199	DM42_2230	annotation not available	annotation not available	0.490

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