STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlut_syn: glutathione synthase (318 aa)    
Predicted Functional Partners:
WI67_15295
gshA_ferroox: glutamate--cysteine ligase
 
  
 0.988
gor
Gluta_reduc_2: glutathione-disulfide reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
   
 0.961
WI67_11050
annotation not available
  
 
 0.953
WL94_32045
Glu_cys_ligase: glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily
 
  
 0.940
ybdK
Putative glutamate--cysteine ligase 2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
    
 0.923
DM42_6047
G_glut_trans: gamma-glutamyltransferase
  
  
 0.921
WL94_12590
Gamma-glutamyltranspeptidase; G_glut_trans: gamma-glutamyltransferase
  
  
 0.920
WL94_16225
annotation not available
   
 
 0.918
pepN
pepN_proteo: aminopeptidase N
   
 
 0.918
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides; Belongs to the peptidase M17 family
  
 
  0.911
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (9%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >