Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2210 | DM42_5584 | DM42_2210 | DM42_5584 | annotation not available | annotation not available | 0.880 |
DM42_2210 | DM42_919 | DM42_2210 | DM42_919 | annotation not available | annotation not available | 0.922 |
DM42_2210 | IscS | DM42_2210 | DM42_4698 | annotation not available | annotation not available | 0.865 |
DM42_2210 | MoaD | DM42_2210 | DM42_7190 | annotation not available | annotation not available | 0.880 |
DM42_2210 | iscS | DM42_2210 | DM42_4355 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.868 |
DM42_2210 | iscS_2 | DM42_2210 | DM42_2962 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.868 |
DM42_2210 | moaD | DM42_2210 | DM42_3249 | annotation not available | annotation not available | 0.989 |
DM42_2210 | thiC | DM42_2210 | DM42_499 | annotation not available | Thiamine biosynthesis protein thic; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction | 0.864 |
DM42_2210 | thiE | DM42_2210 | DM42_1408 | annotation not available | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) | 0.837 |
DM42_2210 | thiG | DM42_2210 | DM42_1409 | annotation not available | Thiazole biosynthesis thig family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S | 0.864 |
DM42_5584 | DM42_2210 | DM42_5584 | DM42_2210 | annotation not available | annotation not available | 0.880 |
DM42_5584 | MoaD | DM42_5584 | DM42_7190 | annotation not available | annotation not available | 0.800 |
DM42_5584 | moaD | DM42_5584 | DM42_3249 | annotation not available | annotation not available | 0.800 |
DM42_919 | DM42_2210 | DM42_919 | DM42_2210 | annotation not available | annotation not available | 0.922 |
IscS | DM42_2210 | DM42_4698 | DM42_2210 | annotation not available | annotation not available | 0.865 |
IscS | iscS | DM42_4698 | DM42_4355 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.813 |
IscS | iscS_2 | DM42_4698 | DM42_2962 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.813 |
MoaD | DM42_2210 | DM42_7190 | DM42_2210 | annotation not available | annotation not available | 0.880 |
MoaD | DM42_5584 | DM42_7190 | DM42_5584 | annotation not available | annotation not available | 0.800 |
MoaD | moaD | DM42_7190 | DM42_3249 | annotation not available | annotation not available | 0.820 |
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