Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2228 | rapZ | DM42_2228 | DM42_2275 | Hypothetical protein; DUF2909 domain-containing protein | P-loop atpase family protein; Displays ATPase and GTPase activities | 0.637 |
DM42_2274 | DM42_2277 | DM42_2274 | DM42_2277 | annotation not available | annotation not available | 0.416 |
DM42_2274 | hprK | DM42_2274 | DM42_2276 | annotation not available | Hpr(ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr) | 0.591 |
DM42_2274 | rapZ | DM42_2274 | DM42_2275 | annotation not available | P-loop atpase family protein; Displays ATPase and GTPase activities | 0.842 |
DM42_2277 | DM42_2274 | DM42_2277 | DM42_2274 | annotation not available | annotation not available | 0.416 |
DM42_2277 | DM42_2284 | DM42_2277 | DM42_2284 | annotation not available | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | 0.487 |
DM42_2277 | RpoN | DM42_2277 | DM42_2279 | annotation not available | Rna polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released | 0.667 |
DM42_2277 | hprK | DM42_2277 | DM42_2276 | annotation not available | Hpr(ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr) | 0.881 |
DM42_2277 | lptA | DM42_2277 | DM42_2281 | annotation not available | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | 0.511 |
DM42_2277 | nagE | DM42_2277 | DM42_2248 | annotation not available | N-acetylglucosamine pts system eiicba or eiicb component; PTS N-acetyl-D-glucosamine transporter; PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component | 0.774 |
DM42_2277 | raiA | DM42_2277 | DM42_2278 | annotation not available | Putative sigma-54 modulation protein; Ribosome hibernation promoting factor; yfiA: ribosomal subunit interface protein | 0.768 |
DM42_2277 | rapZ | DM42_2277 | DM42_2275 | annotation not available | P-loop atpase family protein; Displays ATPase and GTPase activities | 0.763 |
DM42_2284 | DM42_2277 | DM42_2284 | DM42_2277 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | annotation not available | 0.487 |
DM42_2284 | RpoN | DM42_2284 | DM42_2279 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | Rna polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released | 0.653 |
DM42_2284 | hprK | DM42_2284 | DM42_2276 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | Hpr(ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr) | 0.550 |
DM42_2284 | lptA | DM42_2284 | DM42_2281 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | 0.899 |
DM42_2284 | raiA | DM42_2284 | DM42_2278 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | Putative sigma-54 modulation protein; Ribosome hibernation promoting factor; yfiA: ribosomal subunit interface protein | 0.582 |
DM42_2284 | rapZ | DM42_2284 | DM42_2275 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | P-loop atpase family protein; Displays ATPase and GTPase activities | 0.555 |
DM42_2284 | ribD | DM42_2284 | DM42_881 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate | 0.828 |
RpoN | DM42_2277 | DM42_2279 | DM42_2277 | Rna polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released | annotation not available | 0.667 |
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