STRINGSTRING
WL94_14180 protein (Burkholderia cepacia) - STRING interaction network
"WL94_14180" - Phasin: phasin family domain protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_14180Phasin- phasin family domain protein (194 aa)    
Predicted Functional Partners:
DM42_2162
Conserved hypothetical protein (247 aa)
   
     
  0.779
WI67_14170
Uncharacterized protein (195 aa)
   
          0.765
WI67_21510
annotation not available (269 aa)
   
          0.697
phaR
PHA_reg_PhaR- polyhydroxyalkanoate synthesis repressor PhaR (188 aa)
 
     
  0.658
WI67_04540
annotation not available (375 aa)
   
          0.649
WI67_11640
annotation not available (275 aa)
   
          0.629
WI67_16665
annotation not available (126 aa)
   
          0.623
WI67_07215
Uncharacterized protein (130 aa)
   
          0.617
WL94_25340
annotation not available (356 aa)
   
          0.613
DM42_6424
annotation not available (99 aa)
   
          0.604
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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