STRINGSTRING
DM42_233 protein (Burkholderia cepacia) - STRING interaction network
"DM42_233" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_233annotation not available (237 aa)    
Predicted Functional Partners:
DM42_231
annotation not available (185 aa)
 
          0.858
DM42_232
annotation not available (338 aa)
 
          0.781
phbB
acAcCoA_reduct- acetoacetyl-CoA reductase family protein (248 aa)
    
          0.647
DM42_5374
annotation not available (291 aa)
    
          0.629
DM42_6304
annotation not available (251 aa)
    
          0.619
DM42_6948
Beta-ketoacyl synthase, C-terminal domain protein (424 aa)
 
 
  0.603
WL94_05495
annotation not available (258 aa)
    
 
  0.568
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (410 aa)
 
 
  0.560
WI67_23425
annotation not available (254 aa)
    
          0.552
WL94_11735
annotation not available (268 aa)
    
          0.529
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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