Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1440 | DM42_2337 | DM42_1440 | DM42_2337 | annotation not available | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | 0.684 |
DM42_1440 | DM42_2437 | DM42_1440 | DM42_2437 | annotation not available | annotation not available | 0.513 |
DM42_1440 | DM42_2729 | DM42_1440 | DM42_2729 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.593 |
DM42_1440 | DM42_2827 | DM42_1440 | DM42_2827 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.783 |
DM42_1440 | DM42_2936 | DM42_1440 | DM42_2936 | annotation not available | annotation not available | 0.402 |
DM42_1440 | ccsB | DM42_1440 | DM42_1439 | annotation not available | cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB | 0.991 |
DM42_2337 | DM42_1440 | DM42_2337 | DM42_1440 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | annotation not available | 0.684 |
DM42_2337 | DM42_2338 | DM42_2337 | DM42_2338 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | annotation not available | 0.783 |
DM42_2337 | DM42_2339 | DM42_2337 | DM42_2339 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | Hypothetical protein; Uncharacterized protein | 0.782 |
DM42_2337 | DM42_2437 | DM42_2337 | DM42_2437 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | annotation not available | 0.681 |
DM42_2337 | DM42_2729 | DM42_2337 | DM42_2729 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | Hypothetical protein; Uncharacterized protein | 0.747 |
DM42_2337 | DM42_2827 | DM42_2337 | DM42_2827 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | Hypothetical protein; Uncharacterized protein | 0.720 |
DM42_2337 | DM42_2936 | DM42_2337 | DM42_2936 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | annotation not available | 0.687 |
DM42_2337 | ccsB | DM42_2337 | DM42_1439 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB | 0.692 |
DM42_2337 | ppsA | DM42_2337 | DM42_3096 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate | 0.640 |
DM42_2337 | ubiE | DM42_2337 | DM42_2340 | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) | 0.667 |
DM42_2338 | DM42_2337 | DM42_2338 | DM42_2337 | annotation not available | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | 0.783 |
DM42_2338 | DM42_2339 | DM42_2338 | DM42_2339 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.893 |
DM42_2338 | ubiE | DM42_2338 | DM42_2340 | annotation not available | Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) | 0.805 |
DM42_2339 | DM42_2337 | DM42_2339 | DM42_2337 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; FAD linked oxidase, C-terminal domain protein | 0.782 |
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