• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ubiE protein (Burkholderia cepacia) - STRING interaction network
"ubiE" - Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiEUbiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) (243 aa)    
Predicted Functional Partners:
WL94_22030
2-polyprenyl-6-methoxyphenol 4-hydroxylase; ubi-OHases- ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein (395 aa)
   
 
  0.942
coq7
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol; Belongs to the COQ7 family (208 aa)
     
  0.914
WL94_33810
NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family (200 aa)
     
    0.906
WL94_27600
NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family (206 aa)
     
    0.906
WI67_01315
annotation not available (190 aa)
     
    0.906
DM42_7310
annotation not available (256 aa)
         
  0.901
DM42_4284
annotation not available (259 aa)
         
  0.901
ubiB
Probable protein kinase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis (525 aa)
 
 
  0.867
WI67_14620
Uncharacterized protein (137 aa)
       
  0.809
WI67_14610
annotation not available (343 aa)
              0.804
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (15%) [HD]