Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2032 | DM42_2346 | DM42_2032 | DM42_2346 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.461 |
DM42_2032 | DM42_3184 | DM42_2032 | DM42_3184 | annotation not available | annotation not available | 0.435 |
DM42_2342 | DM42_2344 | DM42_2342 | DM42_2344 | annotation not available | annotation not available | 0.820 |
DM42_2342 | DM42_2346 | DM42_2342 | DM42_2346 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.633 |
DM42_2342 | Regulatory | DM42_2342 | DM42_2345 | annotation not available | cxxC_CxxC_SSSS: regulatory , FmdB family domain protein | 0.643 |
DM42_2342 | aspS | DM42_2342 | DM42_2347 | annotation not available | Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn) | 0.426 |
DM42_2342 | nudB | DM42_2342 | DM42_2348 | annotation not available | annotation not available | 0.448 |
DM42_2342 | ubiB | DM42_2342 | DM42_2343 | annotation not available | 2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis | 0.903 |
DM42_2344 | DM42_2342 | DM42_2344 | DM42_2342 | annotation not available | annotation not available | 0.820 |
DM42_2344 | DM42_2346 | DM42_2344 | DM42_2346 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.451 |
DM42_2344 | Regulatory | DM42_2344 | DM42_2345 | annotation not available | cxxC_CxxC_SSSS: regulatory , FmdB family domain protein | 0.579 |
DM42_2344 | ubiB | DM42_2344 | DM42_2343 | annotation not available | 2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis | 0.826 |
DM42_2346 | DM42_2032 | DM42_2346 | DM42_2032 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.461 |
DM42_2346 | DM42_2342 | DM42_2346 | DM42_2342 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.633 |
DM42_2346 | DM42_2344 | DM42_2346 | DM42_2344 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.451 |
DM42_2346 | DM42_3184 | DM42_2346 | DM42_3184 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.516 |
DM42_2346 | Regulatory | DM42_2346 | DM42_2345 | Hypothetical protein; Uncharacterized protein | cxxC_CxxC_SSSS: regulatory , FmdB family domain protein | 0.764 |
DM42_2346 | aspS | DM42_2346 | DM42_2347 | Hypothetical protein; Uncharacterized protein | Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn) | 0.781 |
DM42_2346 | clsB | DM42_2346 | DM42_2349 | Hypothetical protein; Uncharacterized protein | Phospholipase d family protein; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol | 0.560 |
DM42_2346 | nudB | DM42_2346 | DM42_2348 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.607 |
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