Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WL94_14875 | WL94_14880 | DM42_2359 | DM42_2360 | annotation not available | annotation not available | 0.996 |
| WL94_14875 | lolA | DM42_2359 | DM42_864 | annotation not available | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) | 0.482 |
| WL94_14875 | lptD | DM42_2359 | DM42_2361 | annotation not available | LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane | 0.738 |
| WL94_14875 | pdxA | DM42_2359 | DM42_2363 | annotation not available | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | 0.600 |
| WL94_14875 | surA | DM42_2359 | DM42_2362 | annotation not available | Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation | 0.658 |
| WL94_14880 | WL94_14875 | DM42_2360 | DM42_2359 | annotation not available | annotation not available | 0.996 |
| WL94_14880 | WL94_19965 | DM42_2360 | DM42_790 | annotation not available | PGP_bact- phosphoglycolate phosphatase, bacterial | 0.941 |
| WL94_14880 | WL94_29145 | DM42_2360 | DM42_27 | annotation not available | annotation not available | 0.900 |
| WL94_14880 | chb | DM42_2360 | DM42_2249 | annotation not available | annotation not available | 0.900 |
| WL94_14880 | glmU | DM42_2360 | DM42_2028 | annotation not available | Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain | 0.906 |
| WL94_14880 | lolA | DM42_2360 | DM42_864 | annotation not available | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) | 0.635 |
| WL94_14880 | lptD | DM42_2360 | DM42_2361 | annotation not available | LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane | 0.811 |
| WL94_14880 | nagZ | DM42_2360 | DM42_687 | annotation not available | Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides; Belongs to the glycosyl hydrolase 3 family. NagZ subfamily | 0.939 |
| WL94_14880 | pdxA | DM42_2360 | DM42_2363 | annotation not available | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | 0.660 |
| WL94_14880 | surA | DM42_2360 | DM42_2362 | annotation not available | Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation | 0.705 |
| WL94_19965 | WL94_14880 | DM42_790 | DM42_2360 | PGP_bact- phosphoglycolate phosphatase, bacterial | annotation not available | 0.941 |
| WL94_29145 | WL94_14880 | DM42_27 | DM42_2360 | annotation not available | annotation not available | 0.900 |
| WL94_29145 | chb | DM42_27 | DM42_2249 | annotation not available | annotation not available | 0.944 |
| WL94_29145 | nagZ | DM42_27 | DM42_687 | annotation not available | Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides; Belongs to the glycosyl hydrolase 3 family. NagZ subfamily | 0.924 |
| chb | WL94_14880 | DM42_2249 | DM42_2360 | annotation not available | annotation not available | 0.900 |
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