DM42_2388 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

DM42_2388

annotation not available (354 aa)

Predicted Functional Partners:

DM42_2389

0.851

DM42_2386

0.776

DM42_2385

0.685

WL94_27475

0.674

WL94_27465

0.668

DM42_2390

0.647

WL94_27480

0.642

DM42_2391

0.619

WI67_03455

0.533

DM42_2387

0.522

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_2385	DM42_2386	DM42_2385	DM42_2386	Oxidoreductase family, C-terminal alpha/beta domain protein	annotation not available	0.980
DM42_2385	DM42_2387	DM42_2385	DM42_2387	Oxidoreductase family, C-terminal alpha/beta domain protein	annotation not available	0.614
DM42_2385	DM42_2388	DM42_2385	DM42_2388	Oxidoreductase family, C-terminal alpha/beta domain protein	annotation not available	0.685
DM42_2385	DM42_2389	DM42_2385	DM42_2389	Oxidoreductase family, C-terminal alpha/beta domain protein	annotation not available	0.436
DM42_2385	WL94_27465	DM42_2385	DM42_273	Oxidoreductase family, C-terminal alpha/beta domain protein	annotation not available	0.659
DM42_2385	WL94_27475	DM42_2385	DM42_271	Oxidoreductase family, C-terminal alpha/beta domain protein	annotation not available	0.984
DM42_2385	WL94_27480	DM42_2385	DM42_270	Oxidoreductase family, C-terminal alpha/beta domain protein	Oxidoreductase family, C-terminal alpha/beta domain protein	0.700
DM42_2386	DM42_2385	DM42_2386	DM42_2385	annotation not available	Oxidoreductase family, C-terminal alpha/beta domain protein	0.980
DM42_2386	DM42_2387	DM42_2386	DM42_2387	annotation not available	annotation not available	0.850
DM42_2386	DM42_2388	DM42_2386	DM42_2388	annotation not available	annotation not available	0.776
DM42_2386	DM42_2389	DM42_2386	DM42_2389	annotation not available	annotation not available	0.743
DM42_2386	DM42_2390	DM42_2386	DM42_2390	annotation not available	mocE_fam_FeS- Rieske [2Fe-2S] domain , MocE subfamily protein	0.549
DM42_2386	DM42_2391	DM42_2386	DM42_2391	annotation not available	annotation not available	0.560
DM42_2386	WL94_27465	DM42_2386	DM42_273	annotation not available	annotation not available	0.801
DM42_2386	WL94_27475	DM42_2386	DM42_271	annotation not available	annotation not available	0.971
DM42_2386	WL94_27480	DM42_2386	DM42_270	annotation not available	Oxidoreductase family, C-terminal alpha/beta domain protein	0.675
DM42_2387	DM42_2385	DM42_2387	DM42_2385	annotation not available	Oxidoreductase family, C-terminal alpha/beta domain protein	0.614
DM42_2387	DM42_2386	DM42_2387	DM42_2386	annotation not available	annotation not available	0.850
DM42_2387	DM42_2388	DM42_2387	DM42_2388	annotation not available	annotation not available	0.522
DM42_2387	DM42_2391	DM42_2387	DM42_2391	annotation not available	annotation not available	0.405

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