DM42_2401 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:

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[Homology]

Score

DM42_2401

annotation not available (168 aa)

Predicted Functional Partners:

DM42_1958

0.782

DM42_5141

0.779

DM42_791

0.779

DM42_966

0.779

DM42_1330

0.776

DM42_2182

0.776

DM42_1433

0.775

DM42_2757

0.775

DM42_1020

0.774

DM42_210

0.772

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
DM42_1020	DM42_1330	Hypothetical protein; Uncharacterized protein	annotation not available	0.778
DM42_1020	DM42_1433	Hypothetical protein; Uncharacterized protein	Conserved hypothetical protein	0.764
DM42_1020	DM42_1958	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.780
DM42_1020	DM42_210	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.765
DM42_1020	DM42_2182	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.773
DM42_1020	DM42_2401	Hypothetical protein; Uncharacterized protein	annotation not available	0.774
DM42_1020	DM42_2757	Hypothetical protein; Uncharacterized protein	annotation not available	0.778
DM42_1020	DM42_5141	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Plasmid replication region DNA-binding N-term family protein	0.778
DM42_1020	DM42_791	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.776
DM42_1020	DM42_966	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.778
DM42_1330	DM42_1020	annotation not available	Hypothetical protein; Uncharacterized protein	0.778
DM42_1330	DM42_1433	annotation not available	Conserved hypothetical protein	0.714
DM42_1330	DM42_1958	annotation not available	Hypothetical protein; Uncharacterized protein	0.770
DM42_1330	DM42_210	annotation not available	Hypothetical protein; Uncharacterized protein	0.738
DM42_1330	DM42_2182	annotation not available	Hypothetical protein; Uncharacterized protein	0.777
DM42_1330	DM42_2401	annotation not available	annotation not available	0.776
DM42_1330	DM42_2757	annotation not available	annotation not available	0.773
DM42_1330	DM42_5141	annotation not available	Hypothetical protein; Plasmid replication region DNA-binding N-term family protein	0.779
DM42_1330	DM42_791	annotation not available	Hypothetical protein; Uncharacterized protein	0.774
DM42_1330	DM42_966	annotation not available	Hypothetical protein; Uncharacterized protein	0.783

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