STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_15230Two-component system response regulator; Transcriptional regulatory , C terminal family protein (242 aa)    
Predicted Functional Partners:
WL94_15225
annotation not available
 
 0.974
WL94_03885
annotation not available
 
 0.830
WL94_15390
annotation not available
 
 
 0.808
WI67_28635
annotation not available
 
 0.799
DM42_65
annotation not available
 
 
 0.781
DM42_4823
annotation not available
 
 0.760
WL94_12200
annotation not available
 
 
 0.751
DM42_4835
annotation not available
 
 0.733
WL94_14300
Sensor protein; Member of a two-component regulatory system
 
 0.730
WL94_03685
annotation not available
 
 
 
 0.729
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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