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dacB protein (Burkholderia cepacia) - STRING interaction network
"dacB" - PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacBPBP4- D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (510 aa)    
Predicted Functional Partners:
WI67_15435
annotation not available (436 aa)
       
  0.890
WI67_10465
annotation not available (312 aa)
 
   
  0.768
WL94_15085
annotation not available (1035 aa)
   
 
  0.682
leuS
leuS_bact- leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (864 aa)
   
   
  0.672
WL94_15390
annotation not available (448 aa)
              0.572
dapD
dapD- 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family (275 aa)
           
  0.565
mreC
mreC- rod shape-determining protein MreC (354 aa)
 
     
  0.559
mreD
shape_MreD- rod shape-determining protein MreD (170 aa)
 
     
  0.553
WI67_14080
annotation not available (220 aa)
              0.539
nadC
nadC- nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family (293 aa)
           
  0.538
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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