STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_15390annotation not available (448 aa)    
Predicted Functional Partners:
WI67_14080
annotation not available
 
 
 0.979
WI67_28630
Two-component system response regulator; Transcriptional regulatory , C terminal family protein
 
 
 0.830
DM42_66
Transcriptional regulatory , C terminal family protein
 
 
 0.815
WL94_15230
Two-component system response regulator; Transcriptional regulatory , C terminal family protein
 
 
 0.808
DM42_1705
Two-component system response regulator; Transcriptional regulatory , C terminal family protein
 
 
 0.805
DM42_4824
Transcriptional regulatory , C terminal family protein
 
 
 
 0.797
WL94_03890
Two-component system response regulator; Transcriptional regulatory , C terminal family protein
 
 
 
 0.782
WL94_10875
Two-component system response regulator; Transcriptional regulatory , C terminal family protein
 
 
 0.776
WI67_23570
Two-component system response regulator; Transcriptional regulatory , C terminal family protein
 
 
 0.769
WI67_20605
annotation not available
 
 
 0.733
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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