Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM42_1130 | DM42_1131 | annotation not available | Uncharacterized protein | 0.980 |
DM42_1130 | DM42_2454 | annotation not available | annotation not available | 0.428 |
DM42_1131 | DM42_1130 | Uncharacterized protein | annotation not available | 0.980 |
DM42_1131 | DM42_2454 | Uncharacterized protein | annotation not available | 0.497 |
DM42_170 | DM42_2454 | annotation not available | annotation not available | 0.410 |
DM42_2453 | DM42_2454 | Peptidase do family protein; Belongs to the peptidase S1C family | annotation not available | 0.549 |
DM42_2454 | DM42_1130 | annotation not available | annotation not available | 0.428 |
DM42_2454 | DM42_1131 | annotation not available | Uncharacterized protein | 0.497 |
DM42_2454 | DM42_170 | annotation not available | annotation not available | 0.410 |
DM42_2454 | DM42_2453 | annotation not available | Peptidase do family protein; Belongs to the peptidase S1C family | 0.549 |
DM42_2454 | DM42_2455 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.532 |
DM42_2454 | DM42_2456 | annotation not available | annotation not available | 0.478 |
DM42_2454 | DM42_2844 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.458 |
DM42_2454 | DM42_3216 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.419 |
DM42_2454 | DM42_4072 | annotation not available | annotation not available | 0.426 |
DM42_2455 | DM42_2454 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.532 |
DM42_2455 | DM42_2456 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.783 |
DM42_2456 | DM42_2454 | annotation not available | annotation not available | 0.478 |
DM42_2456 | DM42_2455 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.783 |
DM42_2844 | DM42_2454 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.458 |
page 1 of 2