Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_246 | DM42_247 | DM42_246 | DM42_247 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.851 |
DM42_246 | DM42_248 | DM42_246 | DM42_248 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.702 |
DM42_246 | YihY | DM42_246 | DM42_244 | Hypothetical protein; Uncharacterized protein | yihY_not_rbn: YihY family inner membrane domain protein | 0.721 |
DM42_246 | wrbA | DM42_246 | DM42_245 | Hypothetical protein; Uncharacterized protein | Nad(p)h dehydrogenase (quinone); Belongs to the WrbA family | 0.895 |
DM42_247 | DM42_246 | DM42_247 | DM42_246 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.851 |
DM42_247 | DM42_248 | DM42_247 | DM42_248 | annotation not available | annotation not available | 0.762 |
DM42_247 | DM42_3492 | DM42_247 | DM42_3492 | annotation not available | annotation not available | 0.471 |
DM42_247 | DM42_745 | DM42_247 | DM42_745 | annotation not available | Dihydrofolate reductase family protein; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis | 0.401 |
DM42_247 | YihY | DM42_247 | DM42_244 | annotation not available | yihY_not_rbn: YihY family inner membrane domain protein | 0.705 |
DM42_247 | wrbA | DM42_247 | DM42_245 | annotation not available | Nad(p)h dehydrogenase (quinone); Belongs to the WrbA family | 0.851 |
DM42_248 | DM42_246 | DM42_248 | DM42_246 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.702 |
DM42_248 | DM42_247 | DM42_248 | DM42_247 | annotation not available | annotation not available | 0.762 |
DM42_248 | YihY | DM42_248 | DM42_244 | annotation not available | yihY_not_rbn: YihY family inner membrane domain protein | 0.484 |
DM42_248 | wrbA | DM42_248 | DM42_245 | annotation not available | Nad(p)h dehydrogenase (quinone); Belongs to the WrbA family | 0.702 |
DM42_3492 | DM42_247 | DM42_3492 | DM42_247 | annotation not available | annotation not available | 0.471 |
DM42_745 | DM42_247 | DM42_745 | DM42_247 | Dihydrofolate reductase family protein; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis | annotation not available | 0.401 |
YihY | DM42_246 | DM42_244 | DM42_246 | yihY_not_rbn: YihY family inner membrane domain protein | Hypothetical protein; Uncharacterized protein | 0.721 |
YihY | DM42_247 | DM42_244 | DM42_247 | yihY_not_rbn: YihY family inner membrane domain protein | annotation not available | 0.705 |
YihY | DM42_248 | DM42_244 | DM42_248 | yihY_not_rbn: YihY family inner membrane domain protein | annotation not available | 0.484 |
YihY | wrbA | DM42_244 | DM42_245 | yihY_not_rbn: YihY family inner membrane domain protein | Nad(p)h dehydrogenase (quinone); Belongs to the WrbA family | 0.721 |
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