STRINGSTRING
mdlC protein (Burkholderia cepacia) - STRING interaction network
"mdlC" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdlCannotation not available (534 aa)    
Predicted Functional Partners:
DM42_2487
annotation not available (483 aa)
 
  0.981
xylC
annotation not available (489 aa)
 
 
  0.911
DM42_2485
annotation not available (303 aa)
 
          0.821
DM42_2488
apbA_panE- 2-dehydropantoate 2-reductase family protein (314 aa)
 
          0.783
WL94_15815
annotation not available (1567 aa)
   
   
  0.696
ilvN
Acolac_sm- acetolactate synthase, small subunit (163 aa)
 
 
  0.674
DM42_2489
annotation not available (468 aa)
 
     
  0.565
WL94_04345
ilvD- dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family (557 aa)
 
  0.564
ilvC
Ketol-acid reductoisomerase (NADP(+)); Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate; Belongs to the ketol-acid reductoisomerase family (338 aa)
 
   
  0.558
WI67_22900
ilvD- dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family (619 aa)
 
  0.553
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (16%) [HD]