Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1305 | DM42_2501 | DM42_1305 | DM42_2501 | annotation not available | annotation not available | 0.466 |
DM42_1305 | DM42_2505 | DM42_1305 | DM42_2505 | annotation not available | annotation not available | 0.621 |
DM42_1305 | nlpD_3 | DM42_1305 | DM42_403 | annotation not available | annotation not available | 0.635 |
DM42_2501 | DM42_1305 | DM42_2501 | DM42_1305 | annotation not available | annotation not available | 0.466 |
DM42_2501 | DM42_2505 | DM42_2501 | DM42_2505 | annotation not available | annotation not available | 0.585 |
DM42_2505 | DM42_1305 | DM42_2505 | DM42_1305 | annotation not available | annotation not available | 0.621 |
DM42_2505 | DM42_2501 | DM42_2505 | DM42_2501 | annotation not available | annotation not available | 0.585 |
DM42_2505 | DM42_3184 | DM42_2505 | DM42_3184 | annotation not available | annotation not available | 0.830 |
DM42_2505 | DM42_5912 | DM42_2505 | DM42_5912 | annotation not available | annotation not available | 0.800 |
DM42_2505 | chb | DM42_2505 | DM42_2249 | annotation not available | annotation not available | 0.900 |
DM42_2505 | ldcA | DM42_2505 | DM42_3126 | annotation not available | annotation not available | 0.900 |
DM42_2505 | nagZ | DM42_2505 | DM42_687 | annotation not available | Beta-n-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides | 0.907 |
DM42_2505 | nlpD_3 | DM42_2505 | DM42_403 | annotation not available | annotation not available | 0.565 |
DM42_2505 | queG | DM42_2505 | DM42_2507 | annotation not available | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) | 0.755 |
DM42_2505 | tsaE | DM42_2505 | DM42_2506 | annotation not available | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE | 0.919 |
DM42_3184 | DM42_2505 | DM42_3184 | DM42_2505 | annotation not available | annotation not available | 0.830 |
DM42_3184 | DM42_5912 | DM42_3184 | DM42_5912 | annotation not available | annotation not available | 0.804 |
DM42_3184 | ldcA | DM42_3184 | DM42_3126 | annotation not available | annotation not available | 0.493 |
DM42_3184 | nlpD_3 | DM42_3184 | DM42_403 | annotation not available | annotation not available | 0.607 |
DM42_3184 | queG | DM42_3184 | DM42_2507 | annotation not available | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) | 0.974 |
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