Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_2505 | DM42_3184 | DM42_2505 | DM42_3184 | annotation not available | annotation not available | 0.830 |
| DM42_2505 | miaA | DM42_2505 | DM42_1073 | annotation not available | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | 0.418 |
| DM42_2505 | mutL | DM42_2505 | DM42_1072 | annotation not available | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.541 |
| DM42_2505 | queG | DM42_2505 | DM42_2507 | annotation not available | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) | 0.755 |
| DM42_2505 | tsaE | DM42_2505 | DM42_2506 | annotation not available | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE | 0.919 |
| DM42_2505 | xerD | DM42_2505 | DM42_2509 | annotation not available | Integrase/recombinase xerd; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids | 0.559 |
| DM42_3184 | DM42_2505 | DM42_3184 | DM42_2505 | annotation not available | annotation not available | 0.830 |
| DM42_3184 | miaA | DM42_3184 | DM42_1073 | annotation not available | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | 0.831 |
| DM42_3184 | mutL | DM42_3184 | DM42_1072 | annotation not available | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.674 |
| DM42_3184 | polA | DM42_3184 | DM42_4183 | annotation not available | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.455 |
| DM42_3184 | queG | DM42_3184 | DM42_2507 | annotation not available | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) | 0.974 |
| DM42_3184 | tsaD | DM42_3184 | DM42_4174 | annotation not available | Trna threonylcarbamoyl adenosine modification protein ygjd; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction | 0.613 |
| DM42_3184 | tsaE | DM42_3184 | DM42_2506 | annotation not available | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE | 0.898 |
| DM42_3184 | yeaZ | DM42_3184 | DM42_3054 | annotation not available | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB; T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ | 0.639 |
| miaA | DM42_2505 | DM42_1073 | DM42_2505 | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | annotation not available | 0.418 |
| miaA | DM42_3184 | DM42_1073 | DM42_3184 | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | annotation not available | 0.831 |
| miaA | mutL | DM42_1073 | DM42_1072 | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.928 |
| miaA | polA | DM42_1073 | DM42_4183 | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.762 |
| miaA | queG | DM42_1073 | DM42_2507 | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) | 0.415 |
| miaA | tsaD | DM42_1073 | DM42_4174 | Trna dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | Trna threonylcarbamoyl adenosine modification protein ygjd; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction | 0.507 |
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