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WI67_13805 protein (Burkholderia cepacia) - STRING interaction network
"WI67_13805" - Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_13805Ogt- methylated-DNA-[]-cysteine S-methyltransferase family protein (156 aa)    
Predicted Functional Partners:
xerD
recomb_XerD- tyrosine recombinase XerD (316 aa)
 
 
 
  0.920
queG
Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family (411 aa)
              0.665
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (917 aa)
     
 
  0.585
DM42_4667
alkA N-terminal domain protein (483 aa)
 
   
  0.524
WI67_13815
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; T6A_YjeE- tRNA threonylcarbamoyl adenosine modification protein YjeE (184 aa)
              0.514
WL94_08935
annotation not available (508 aa)
              0.493
DM42_5617
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (628 aa)
     
 
  0.430
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (683 aa)
     
 
  0.430
DM42_3834
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (508 aa)
     
 
  0.430
rpoS
rpoS_proteo- RNA polymerase sigma factor RpoS (362 aa)
     
 
  0.430
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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