STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argFOrnithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (309 aa)    
Predicted Functional Partners:
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family
 0.997
argA
Amino-acid n-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily
 
 
 0.991
argJ
Glutamate n-acetyltransferase / amino-acid n-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
 
 
 0.986
argG
Belongs to the argininosuccinate synthase family. Type 2 subfamily
 
 
 0.981
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family
 
 0.960
argE
acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily
  
 0.944
ArgE
acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily
  
 0.944
DM42_5846
annotation not available
  
 0.923
DM42_5497
Guanidinobutyrase; Belongs to the arginase family
     
 0.915
DM42_962
Dihydroorotase; Multifunctional complex type domain protein; pyrC_multi: dihydroorotase, multifunctional complex type domain protein
 
 0.901
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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