• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
VL15_06440 protein (Burkholderia cepacia) - STRING interaction network
"VL15_06440" - HlyD family secretion protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VL15_06440HlyD family secretion protein; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (291 aa)    
Predicted Functional Partners:
fusB
Fusaric acid resistance protein FusB; Involved in the resistance (detoxification) of the fungal toxin fusaric acid (734 aa)
 
  0.972
WL94_27575
outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (495 aa)
 
 
  0.933
WI67_07185
DUF1656 domain-containing protein (67 aa)
 
          0.929
WL94_11780
annotation not available (727 aa)
 
  0.851
DM42_6192
annotation not available (683 aa)
 
  0.796
WL94_33995
annotation not available (707 aa)
 
  0.730
WL94_27845
MarR family transcriptional regulator; outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (498 aa)
 
 
  0.579
WI67_07200
annotation not available (313 aa)
 
          0.545
DM42_7421
annotation not available (107 aa)
 
 
 
  0.501
DM42_5655
outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (620 aa)
 
 
  0.493
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (20%) [HD]