Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1419 | DM42_2544 | DM42_1419 | DM42_2544 | annotation not available | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | 0.840 |
DM42_1419 | DM42_3245 | DM42_1419 | DM42_3245 | annotation not available | annotation not available | 0.800 |
DM42_1419 | acnA | DM42_1419 | DM42_4125 | annotation not available | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate | 0.703 |
DM42_1419 | acnB | DM42_1419 | DM42_6116 | annotation not available | Aconitate hydratase 2 / 2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family | 0.632 |
DM42_1419 | gltD | DM42_1419 | DM42_1418 | annotation not available | annotation not available | 0.999 |
DM42_1419 | icd | DM42_1419 | DM42_2543 | annotation not available | Prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent | 0.930 |
DM42_1419 | mdh | DM42_1419 | DM42_4121 | annotation not available | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate | 0.931 |
DM42_1419 | sucA | DM42_1419 | DM42_189 | annotation not available | 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component | 0.930 |
DM42_2544 | DM42_1419 | DM42_2544 | DM42_1419 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | annotation not available | 0.840 |
DM42_2544 | DM42_3245 | DM42_2544 | DM42_3245 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | annotation not available | 0.827 |
DM42_2544 | DM42_4292 | DM42_2544 | DM42_4292 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | Hypothetical protein; Aconitase subunit 1 | 0.900 |
DM42_2544 | acnA | DM42_2544 | DM42_4125 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate | 0.939 |
DM42_2544 | acnB | DM42_2544 | DM42_6116 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | Aconitate hydratase 2 / 2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family | 0.951 |
DM42_2544 | gltD | DM42_2544 | DM42_1418 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | annotation not available | 0.818 |
DM42_2544 | icd | DM42_2544 | DM42_2543 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | Prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent | 0.935 |
DM42_2544 | mdh | DM42_2544 | DM42_4121 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate | 0.868 |
DM42_2544 | purB | DM42_2544 | DM42_1176 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily | 0.829 |
DM42_2544 | sucA | DM42_2544 | DM42_189 | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component | 0.923 |
DM42_3245 | DM42_1419 | DM42_3245 | DM42_1419 | annotation not available | annotation not available | 0.800 |
DM42_3245 | DM42_2544 | DM42_3245 | DM42_2544 | annotation not available | Isocitrate dehydrogenase, nadp-dependent; Belongs to the monomeric-type IDH family | 0.827 |
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