Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WI67_13530 | WL94_04105 | DM42_2559 | DM42_2558 | annotation not available | annotation not available | 0.880 |
| WI67_13530 | purN | DM42_2559 | DM42_2557 | annotation not available | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate | 0.859 |
| WI67_13530 | ribF | DM42_2559 | DM42_2556 | annotation not available | ribF- riboflavin biosynthesis protein RibF; Belongs to the ribF family | 0.556 |
| WL94_04105 | WI67_13530 | DM42_2558 | DM42_2559 | annotation not available | annotation not available | 0.880 |
| WL94_04105 | WL94_35035 | DM42_2558 | DM42_1230 | annotation not available | annotation not available | 0.705 |
| WL94_04105 | ftsJ | DM42_2558 | DM42_425 | annotation not available | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 0.834 |
| WL94_04105 | ksgA | DM42_2558 | DM42_2364 | annotation not available | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 0.786 |
| WL94_04105 | purN | DM42_2558 | DM42_2557 | annotation not available | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate | 0.898 |
| WL94_04105 | ribF | DM42_2558 | DM42_2556 | annotation not available | ribF- riboflavin biosynthesis protein RibF; Belongs to the ribF family | 0.723 |
| WL94_04105 | rplJ | DM42_2558 | DM42_1483 | annotation not available | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors | 0.763 |
| WL94_04105 | rpsA | DM42_2558 | DM42_780 | annotation not available | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence | 0.781 |
| WL94_04105 | rumA | DM42_2558 | DM42_3283 | annotation not available | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA | 0.737 |
| WL94_04105 | truB | DM42_2558 | DM42_197 | annotation not available | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs | 0.817 |
| WL94_35035 | WL94_04105 | DM42_1230 | DM42_2558 | annotation not available | annotation not available | 0.705 |
| WL94_35035 | rpsA | DM42_1230 | DM42_780 | annotation not available | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence | 0.409 |
| ftsJ | WL94_04105 | DM42_425 | DM42_2558 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | annotation not available | 0.834 |
| ftsJ | ksgA | DM42_425 | DM42_2364 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 0.913 |
| ftsJ | rplJ | DM42_425 | DM42_1483 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors | 0.746 |
| ftsJ | rpsA | DM42_425 | DM42_780 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence | 0.842 |
| ftsJ | rumA | DM42_425 | DM42_3283 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA | 0.677 |
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