Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplM | rplQ | DM42_1163 | DM42_1446 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | 0.999 |
| rplM | rplU | DM42_1163 | DM42_1258 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l21; This protein binds to 23S rRNA in the presence of protein L20 | 0.999 |
| rplM | rplX | DM42_1163 | DM42_1462 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit | 0.999 |
| rplM | rpmA | DM42_1163 | DM42_1257 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l27; Belongs to the bacterial ribosomal protein bL27 family | 0.999 |
| rplM | rpmC | DM42_1163 | DM42_1465 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l29; Belongs to the universal ribosomal protein uL29 family | 0.999 |
| rplM | rpmG | DM42_1163 | DM42_2564 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l33; Belongs to the bacterial ribosomal protein bL33 family | 0.999 |
| rplM | rpmJ | DM42_1163 | DM42_1451 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Large subunit ribosomal protein l36; Belongs to the bacterial ribosomal protein bL36 family | 0.999 |
| rplM | rpsI | DM42_1163 | DM42_1162 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Small subunit ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family | 0.999 |
| rplM | rpsN | DM42_1163 | DM42_1460 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Small subunit ribosomal protein s14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.999 |
| rplM | rpsQ | DM42_1163 | DM42_1464 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | Small subunit ribosomal protein s17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | 0.999 |
| rplQ | rplM | DM42_1446 | DM42_1163 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Large subunit ribosomal protein l13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | 0.999 |
| rplQ | rplU | DM42_1446 | DM42_1258 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Large subunit ribosomal protein l21; This protein binds to 23S rRNA in the presence of protein L20 | 0.999 |
| rplQ | rplX | DM42_1446 | DM42_1462 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Large subunit ribosomal protein l24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit | 0.999 |
| rplQ | rpmA | DM42_1446 | DM42_1257 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Large subunit ribosomal protein l27; Belongs to the bacterial ribosomal protein bL27 family | 0.999 |
| rplQ | rpmC | DM42_1446 | DM42_1465 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Large subunit ribosomal protein l29; Belongs to the universal ribosomal protein uL29 family | 0.999 |
| rplQ | rpmG | DM42_1446 | DM42_2564 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Large subunit ribosomal protein l33; Belongs to the bacterial ribosomal protein bL33 family | 0.999 |
| rplQ | rpmJ | DM42_1446 | DM42_1451 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Large subunit ribosomal protein l36; Belongs to the bacterial ribosomal protein bL36 family | 0.999 |
| rplQ | rpsI | DM42_1446 | DM42_1162 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Small subunit ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family | 0.999 |
| rplQ | rpsN | DM42_1446 | DM42_1460 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Small subunit ribosomal protein s14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.999 |
| rplQ | rpsQ | DM42_1446 | DM42_1464 | Large subunit ribosomal protein l17; L17: ribosomal protein L17 | Small subunit ribosomal protein s17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | 0.999 |
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