Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2599 | lptF | DM42_2599 | DM42_2601 | annotation not available | annotation not available | 0.840 |
DM42_2599 | lptG | DM42_2599 | DM42_2600 | annotation not available | annotation not available | 0.840 |
DM42_2599 | pepA | DM42_2599 | DM42_2602 | annotation not available | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides | 0.651 |
DM42_5446 | MsbA | DM42_5446 | DM42_2746 | annotation not available | Atp-binding cassette, subfamily b, bacterial msba; msbA_lipidA: lipid A export permease/ATP-binding protein MsbA | 0.692 |
DM42_5446 | lptB_3 | DM42_5446 | DM42_2280 | annotation not available | annotation not available | 0.846 |
DM42_5446 | lptF | DM42_5446 | DM42_2601 | annotation not available | annotation not available | 0.849 |
DM42_5446 | lptG | DM42_5446 | DM42_2600 | annotation not available | annotation not available | 0.851 |
DM42_5446 | metI | DM42_5446 | DM42_767 | annotation not available | annotation not available | 0.807 |
MsbA | DM42_5446 | DM42_2746 | DM42_5446 | Atp-binding cassette, subfamily b, bacterial msba; msbA_lipidA: lipid A export permease/ATP-binding protein MsbA | annotation not available | 0.692 |
MsbA | lptB_3 | DM42_2746 | DM42_2280 | Atp-binding cassette, subfamily b, bacterial msba; msbA_lipidA: lipid A export permease/ATP-binding protein MsbA | annotation not available | 0.782 |
MsbA | lptF | DM42_2746 | DM42_2601 | Atp-binding cassette, subfamily b, bacterial msba; msbA_lipidA: lipid A export permease/ATP-binding protein MsbA | annotation not available | 0.792 |
MsbA | lptG | DM42_2746 | DM42_2600 | Atp-binding cassette, subfamily b, bacterial msba; msbA_lipidA: lipid A export permease/ATP-binding protein MsbA | annotation not available | 0.820 |
MsbA | metI | DM42_2746 | DM42_767 | Atp-binding cassette, subfamily b, bacterial msba; msbA_lipidA: lipid A export permease/ATP-binding protein MsbA | annotation not available | 0.692 |
lptA | lptB_3 | DM42_2281 | DM42_2280 | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | annotation not available | 0.974 |
lptA | lptC | DM42_2281 | DM42_2282 | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | annotation not available | 0.988 |
lptA | lptD | DM42_2281 | DM42_2361 | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | Organic solvent tolerance family protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane | 0.842 |
lptA | lptF | DM42_2281 | DM42_2601 | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | annotation not available | 0.717 |
lptA | lptG | DM42_2281 | DM42_2600 | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | annotation not available | 0.754 |
lptB_3 | DM42_5446 | DM42_2280 | DM42_5446 | annotation not available | annotation not available | 0.846 |
lptB_3 | MsbA | DM42_2280 | DM42_2746 | annotation not available | Atp-binding cassette, subfamily b, bacterial msba; msbA_lipidA: lipid A export permease/ATP-binding protein MsbA | 0.782 |
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