Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WL94_30205 | WL94_31625 | DM42_2156 | DM42_3239 | annotation not available | annotation not available | 0.908 |
| WL94_30205 | fmt | DM42_2156 | DM42_1884 | annotation not available | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | 0.908 |
| WL94_30205 | guaA | DM42_2156 | DM42_3109 | annotation not available | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.570 |
| WL94_30205 | metE | DM42_2156 | DM42_5495 | annotation not available | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation | 0.926 |
| WL94_30205 | metG | DM42_2156 | DM42_2632 | annotation not available | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily | 0.925 |
| WL94_30205 | metH | DM42_2156 | DM42_2155 | annotation not available | metH- methionine synthase | 0.999 |
| WL94_31625 | WL94_30205 | DM42_3239 | DM42_2156 | annotation not available | annotation not available | 0.908 |
| WL94_31625 | fmt | DM42_3239 | DM42_1884 | annotation not available | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | 0.817 |
| WL94_31625 | metG | DM42_3239 | DM42_2632 | annotation not available | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily | 0.963 |
| WL94_31625 | metH | DM42_3239 | DM42_2155 | annotation not available | metH- methionine synthase | 0.907 |
| dnaX | guaA | DM42_3273 | DM42_3109 | dnaX_nterm- DNA polymerase III, subunit gamma and tau | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.648 |
| dnaX | ksgA | DM42_3273 | DM42_2364 | dnaX_nterm- DNA polymerase III, subunit gamma and tau | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 0.519 |
| dnaX | metG | DM42_3273 | DM42_2632 | dnaX_nterm- DNA polymerase III, subunit gamma and tau | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily | 0.914 |
| fmt | WL94_30205 | DM42_1884 | DM42_2156 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | annotation not available | 0.908 |
| fmt | WL94_31625 | DM42_1884 | DM42_3239 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | annotation not available | 0.817 |
| fmt | metG | DM42_1884 | DM42_2632 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily | 0.963 |
| fmt | metH | DM42_1884 | DM42_2155 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | metH- methionine synthase | 0.910 |
| fmt | pheS | DM42_1884 | DM42_221 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | pheS- phenylalanine--tRNA ligase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily | 0.622 |
| guaA | WL94_30205 | DM42_3109 | DM42_2156 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | annotation not available | 0.570 |
| guaA | dnaX | DM42_3109 | DM42_3273 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | dnaX_nterm- DNA polymerase III, subunit gamma and tau | 0.648 |
page 1 of 3
