Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1766 | DM42_2525 | DM42_1766 | DM42_2525 | Catalase family protein; Has an organic peroxide-dependent peroxidase activity | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | 0.946 |
DM42_1766 | DM42_6500 | DM42_1766 | DM42_6500 | Catalase family protein; Has an organic peroxide-dependent peroxidase activity | annotation not available | 0.488 |
DM42_1766 | katE | DM42_1766 | DM42_7100 | Catalase family protein; Has an organic peroxide-dependent peroxidase activity | Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide | 0.477 |
DM42_1766 | otsB | DM42_1766 | DM42_565 | Catalase family protein; Has an organic peroxide-dependent peroxidase activity | Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose | 0.485 |
DM42_1766 | sodC | DM42_1766 | DM42_2635 | Catalase family protein; Has an organic peroxide-dependent peroxidase activity | annotation not available | 0.962 |
DM42_1766 | tal | DM42_1766 | DM42_2723 | Catalase family protein; Has an organic peroxide-dependent peroxidase activity | Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway | 0.637 |
DM42_2020 | sodC | DM42_2020 | DM42_2635 | annotation not available | annotation not available | 0.608 |
DM42_2525 | DM42_1766 | DM42_2525 | DM42_1766 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | Catalase family protein; Has an organic peroxide-dependent peroxidase activity | 0.946 |
DM42_2525 | DM42_4155 | DM42_2525 | DM42_4155 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | annotation not available | 0.488 |
DM42_2525 | DM42_6472 | DM42_2525 | DM42_6472 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | annotation not available | 0.478 |
DM42_2525 | katE | DM42_2525 | DM42_7100 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide | 0.646 |
DM42_2525 | katG | DM42_2525 | DM42_1113 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | Catalase/peroxidase hpi; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity | 0.926 |
DM42_2525 | sodC | DM42_2525 | DM42_2635 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | annotation not available | 0.733 |
DM42_4155 | DM42_2525 | DM42_4155 | DM42_2525 | annotation not available | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | 0.488 |
DM42_4155 | DM42_6500 | DM42_4155 | DM42_6500 | annotation not available | annotation not available | 0.488 |
DM42_4155 | otsB | DM42_4155 | DM42_565 | annotation not available | Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose | 0.485 |
DM42_4155 | sodC | DM42_4155 | DM42_2635 | annotation not available | annotation not available | 0.639 |
DM42_4155 | tal | DM42_4155 | DM42_2723 | annotation not available | Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway | 0.637 |
DM42_6472 | DM42_2525 | DM42_6472 | DM42_2525 | annotation not available | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | 0.478 |
DM42_6472 | DM42_6500 | DM42_6472 | DM42_6500 | annotation not available | annotation not available | 0.478 |
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