STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_13155annotation not available (178 aa)    
Predicted Functional Partners:
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide
 
 
 0.832
otsB
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose
  
  
 0.623
VL15_09250
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems
   
 
 0.608
DM42_6500
annotation not available
   
 
 0.608
WL94_21815
annotation not available
  
   
 0.606
WI67_03875
Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein
   
 
 0.588
DM42_3157
annotation not available
   
 
 0.588
ahpC
Alkyl hydroperoxide reductase; ahpC: peroxiredoxin
   
 
 0.588
WI67_15945
annotation not available
   
 
 0.583
DM42_4596
annotation not available
   
 
 0.583
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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