Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2384 | DM42_2639 | DM42_2384 | DM42_2639 | HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | 0.426 |
DM42_2477 | DM42_2639 | DM42_2477 | DM42_2639 | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | 0.562 |
DM42_2639 | DM42_2384 | DM42_2639 | DM42_2384 | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein | 0.426 |
DM42_2639 | DM42_2477 | DM42_2639 | DM42_2477 | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | 0.562 |
DM42_2639 | DM42_2641 | DM42_2639 | DM42_2641 | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | annotation not available | 0.422 |
DM42_2639 | argH | DM42_2639 | DM42_2640 | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | argH: argininosuccinate lyase | 0.595 |
DM42_2639 | nagE | DM42_2639 | DM42_2248 | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | N-acetylglucosamine pts system eiicba or eiicb component; PTS N-acetyl-D-glucosamine transporter; PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component | 0.451 |
DM42_2641 | DM42_2639 | DM42_2641 | DM42_2639 | annotation not available | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | 0.422 |
DM42_2641 | argH | DM42_2641 | DM42_2640 | annotation not available | argH: argininosuccinate lyase | 0.593 |
argH | DM42_2639 | DM42_2640 | DM42_2639 | argH: argininosuccinate lyase | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | 0.595 |
argH | DM42_2641 | DM42_2640 | DM42_2641 | argH: argininosuccinate lyase | annotation not available | 0.593 |
nagE | DM42_2639 | DM42_2248 | DM42_2639 | N-acetylglucosamine pts system eiicba or eiicb component; PTS N-acetyl-D-glucosamine transporter; PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component | HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein | 0.451 |