Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CysC | DM42_3692 | DM42_2900 | DM42_3692 | Bifunctional enzyme cysn/cysc; Catalyzes the synthesis of activated sulfate | annotation not available | 0.639 |
CysC | tusA | DM42_2900 | DM42_266 | Bifunctional enzyme cysn/cysc; Catalyzes the synthesis of activated sulfate | Trna 2-thiouridine synthesizing protein a; Belongs to the sulfur carrier protein TusA family | 0.618 |
DM42_267 | tusA | DM42_267 | DM42_266 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Trna 2-thiouridine synthesizing protein a; Belongs to the sulfur carrier protein TusA family | 0.550 |
DM42_3184 | DM42_3692 | DM42_3184 | DM42_3692 | annotation not available | annotation not available | 0.598 |
DM42_3184 | trmU | DM42_3184 | DM42_1144 | annotation not available | Trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 | 0.524 |
DM42_3184 | tusA | DM42_3184 | DM42_266 | annotation not available | Trna 2-thiouridine synthesizing protein a; Belongs to the sulfur carrier protein TusA family | 0.497 |
DM42_3692 | CysC | DM42_3692 | DM42_2900 | annotation not available | Bifunctional enzyme cysn/cysc; Catalyzes the synthesis of activated sulfate | 0.639 |
DM42_3692 | DM42_3184 | DM42_3692 | DM42_3184 | annotation not available | annotation not available | 0.598 |
DM42_3692 | IscS | DM42_3692 | DM42_4698 | annotation not available | annotation not available | 0.426 |
DM42_3692 | iscS | DM42_3692 | DM42_4355 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.426 |
DM42_3692 | iscS_2 | DM42_3692 | DM42_2962 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.426 |
DM42_3692 | moaD | DM42_3692 | DM42_3249 | annotation not available | annotation not available | 0.459 |
DM42_3692 | trmU | DM42_3692 | DM42_1144 | annotation not available | Trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 | 0.645 |
DM42_3692 | tusA | DM42_3692 | DM42_266 | annotation not available | Trna 2-thiouridine synthesizing protein a; Belongs to the sulfur carrier protein TusA family | 0.572 |
IscS | DM42_3692 | DM42_4698 | DM42_3692 | annotation not available | annotation not available | 0.426 |
IscS | iscS | DM42_4698 | DM42_4355 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.813 |
IscS | iscS_2 | DM42_4698 | DM42_2962 | annotation not available | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | 0.813 |
IscS | tusA | DM42_4698 | DM42_266 | annotation not available | Trna 2-thiouridine synthesizing protein a; Belongs to the sulfur carrier protein TusA family | 0.920 |
iscS | DM42_3692 | DM42_4355 | DM42_3692 | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | annotation not available | 0.426 |
iscS | IscS | DM42_4355 | DM42_4698 | Cysteine desulfurase iscs; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins | annotation not available | 0.813 |
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