STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2709annotation not available (152 aa)    
Predicted Functional Partners:
WrbA
NAD(P)H dehydrogenase (quinone); NAD(P)H:quinone oxidoreductase, type IV; flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV; Belongs to the WrbA family
 
      0.865
DM42_2708
phzF_: phenazine biosynthesis , PhzF family protein
  
    0.847
DM42_2710
annotation not available
  
    0.745
DM42_2711
annotation not available
 
     0.634
DM42_2712
annotation not available
       0.504
DM42_2784
annotation not available
       0.491
DM42_1209
annotation not available
  
     0.460
DM42_2707
dGTP triphosphohydrolase; GGDEF: diguanylate cyclase domain protein
       0.449
DM42_1506
annotation not available
 
     0.438
DM42_2629
Hypothetical protein; DUF3460 domain-containing protein
  
     0.424
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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