Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2708 | DM42_2709 | DM42_2708 | DM42_2709 | phzF_: phenazine biosynthesis , PhzF family protein | annotation not available | 0.847 |
DM42_2708 | DM42_2710 | DM42_2708 | DM42_2710 | phzF_: phenazine biosynthesis , PhzF family protein | annotation not available | 0.723 |
DM42_2708 | DM42_2711 | DM42_2708 | DM42_2711 | phzF_: phenazine biosynthesis , PhzF family protein | annotation not available | 0.496 |
DM42_2709 | DM42_2708 | DM42_2709 | DM42_2708 | annotation not available | phzF_: phenazine biosynthesis , PhzF family protein | 0.847 |
DM42_2709 | DM42_2710 | DM42_2709 | DM42_2710 | annotation not available | annotation not available | 0.745 |
DM42_2709 | DM42_2711 | DM42_2709 | DM42_2711 | annotation not available | annotation not available | 0.634 |
DM42_2710 | DM42_2708 | DM42_2710 | DM42_2708 | annotation not available | phzF_: phenazine biosynthesis , PhzF family protein | 0.723 |
DM42_2710 | DM42_2709 | DM42_2710 | DM42_2709 | annotation not available | annotation not available | 0.745 |
DM42_2710 | DM42_2711 | DM42_2710 | DM42_2711 | annotation not available | annotation not available | 0.582 |
DM42_2710 | DM42_4568 | DM42_2710 | DM42_4568 | annotation not available | annotation not available | 0.820 |
DM42_2710 | DM42_4969 | DM42_2710 | DM42_4969 | annotation not available | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate) | 0.517 |
DM42_2710 | IlvD | DM42_2710 | DM42_3831 | annotation not available | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family | 0.553 |
DM42_2710 | LeuA | DM42_2710 | DM42_2802 | annotation not available | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate) | 0.517 |
DM42_2710 | hmuT | DM42_2710 | DM42_5346 | annotation not available | annotation not available | 0.483 |
DM42_2710 | ilvD | DM42_2710 | DM42_2606 | annotation not available | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family | 0.495 |
DM42_2710 | leuA | DM42_2710 | DM42_2257 | annotation not available | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate) | 0.517 |
DM42_2711 | DM42_2708 | DM42_2711 | DM42_2708 | annotation not available | phzF_: phenazine biosynthesis , PhzF family protein | 0.496 |
DM42_2711 | DM42_2709 | DM42_2711 | DM42_2709 | annotation not available | annotation not available | 0.634 |
DM42_2711 | DM42_2710 | DM42_2711 | DM42_2710 | annotation not available | annotation not available | 0.582 |
DM42_4568 | DM42_2710 | DM42_4568 | DM42_2710 | annotation not available | annotation not available | 0.820 |
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