Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_5471 | DM42_5473 | DM42_5471 | DM42_5473 | annotation not available | Shikimate dehydrogenase substrate binding domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) | 0.889 |
| DM42_5471 | pobA | DM42_5471 | DM42_5090 | annotation not available | P-hydroxybenzoate 3-monooxygenase; Pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase | 0.664 |
| DM42_5471 | rutR_7 | DM42_5471 | DM42_2733 | annotation not available | annotation not available | 0.637 |
| DM42_5473 | DM42_5471 | DM42_5473 | DM42_5471 | Shikimate dehydrogenase substrate binding domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) | annotation not available | 0.889 |
| DM42_5473 | pobA | DM42_5473 | DM42_5090 | Shikimate dehydrogenase substrate binding domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) | P-hydroxybenzoate 3-monooxygenase; Pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase | 0.472 |
| DM42_5473 | rutR_7 | DM42_5473 | DM42_2733 | Shikimate dehydrogenase substrate binding domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) | annotation not available | 0.576 |
| pobA | DM42_5471 | DM42_5090 | DM42_5471 | P-hydroxybenzoate 3-monooxygenase; Pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase | annotation not available | 0.664 |
| pobA | DM42_5473 | DM42_5090 | DM42_5473 | P-hydroxybenzoate 3-monooxygenase; Pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase | Shikimate dehydrogenase substrate binding domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) | 0.472 |
| pobA | rutR_7 | DM42_5090 | DM42_2733 | P-hydroxybenzoate 3-monooxygenase; Pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase | annotation not available | 0.400 |
| rutR_7 | DM42_5471 | DM42_2733 | DM42_5471 | annotation not available | annotation not available | 0.637 |
| rutR_7 | DM42_5473 | DM42_2733 | DM42_5473 | annotation not available | Shikimate dehydrogenase substrate binding domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) | 0.576 |
| rutR_7 | pobA | DM42_2733 | DM42_5090 | annotation not available | P-hydroxybenzoate 3-monooxygenase; Pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase | 0.400 |
