Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1061 | DM42_2284 | DM42_1061 | DM42_2284 | annotation not available | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | 0.592 |
DM42_1061 | DM42_2753 | DM42_1061 | DM42_2753 | annotation not available | annotation not available | 0.646 |
DM42_1061 | DM42_932 | DM42_1061 | DM42_932 | annotation not available | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A | 0.432 |
DM42_1061 | rfaD | DM42_1061 | DM42_774 | annotation not available | Adp-l-glycero-d-manno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose | 0.425 |
DM42_1061 | rfaE1 | DM42_1061 | DM42_775 | annotation not available | D-glycero-beta-D-manno-heptose-7-phosphate kinase; Domain I; rfaE_dom_I: bifunctional protein RfaE, domain I | 0.566 |
DM42_2284 | DM42_1061 | DM42_2284 | DM42_1061 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | annotation not available | 0.592 |
DM42_2284 | DM42_2753 | DM42_2284 | DM42_2753 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | annotation not available | 0.518 |
DM42_2284 | DM42_932 | DM42_2284 | DM42_932 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A | 0.913 |
DM42_2284 | lpxA | DM42_2284 | DM42_3091 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | Acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell | 0.910 |
DM42_2284 | rfaD | DM42_2284 | DM42_774 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | Adp-l-glycero-d-manno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose | 0.426 |
DM42_2284 | rfaE1 | DM42_2284 | DM42_775 | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | D-glycero-beta-D-manno-heptose-7-phosphate kinase; Domain I; rfaE_dom_I: bifunctional protein RfaE, domain I | 0.750 |
DM42_2747 | DM42_2753 | DM42_2747 | DM42_2753 | annotation not available | annotation not available | 0.828 |
DM42_2753 | DM42_1061 | DM42_2753 | DM42_1061 | annotation not available | annotation not available | 0.646 |
DM42_2753 | DM42_2284 | DM42_2753 | DM42_2284 | annotation not available | Sugar isomerase, kpsf/gutq family protein; Belongs to the SIS family. GutQ/KpsF subfamily | 0.518 |
DM42_2753 | DM42_2747 | DM42_2753 | DM42_2747 | annotation not available | annotation not available | 0.828 |
DM42_2753 | DM42_2754 | DM42_2753 | DM42_2754 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.572 |
DM42_2753 | DM42_5070 | DM42_2753 | DM42_5070 | annotation not available | annotation not available | 0.473 |
DM42_2753 | DM42_932 | DM42_2753 | DM42_932 | annotation not available | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A | 0.498 |
DM42_2753 | lpxA | DM42_2753 | DM42_3091 | annotation not available | Acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell | 0.507 |
DM42_2753 | rfaD | DM42_2753 | DM42_774 | annotation not available | Adp-l-glycero-d-manno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose | 0.693 |
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