STRINGSTRING
WI67_12505 protein (Burkholderia cepacia) - STRING interaction network
"WI67_12505" - Uncharacterized protein in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_12505Uncharacterized protein (111 aa)    
Predicted Functional Partners:
DM42_1169
Autotrans_barl- outer membrane autotransporter barrel domain protein (1767 aa)
   
          0.567
WL94_24445
Maf-like protein WL94_24445; Maf- septum formation protein Maf (215 aa)
              0.549
WI67_12495
RNaseEG- ribonuclease, Rne/Rng family domain protein (489 aa)
              0.549
DM42_1642
Conserved hypothetical protein (182 aa)
   
          0.528
DM42_1824
Conserved hypothetical protein (301 aa)
   
          0.525
DM42_118
annotation not available (247 aa)
   
        0.516
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (147 aa)
     
      0.474
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (383 aa)
   
          0.460
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family (156 aa)
              0.457
DM42_5957
Conserved hypothetical protein (3799 aa)
   
          0.440
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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