rlmH protein (Burkholderia cepacia) - STRING interaction network

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rlmH

Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family (156 aa)

Predicted Functional Partners:

rsfS

0.965

nadD

0.910

mrdA

0.829

WL94_24445

0.789

WI67_12495

0.789

prmA

0.777

hemF

0.723

gidB

0.694

trmL

0.669

rlmN

0.627

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WI67_12495	WL94_24445	DM42_2760	DM42_2761	RNaseEG- ribonuclease, Rne/Rng family domain protein	Maf-like protein WL94_24445; Maf- septum formation protein Maf	0.905
WI67_12495	hemF	DM42_2760	DM42_2765	RNaseEG- ribonuclease, Rne/Rng family domain protein	Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	0.679
WI67_12495	nadD	DM42_2760	DM42_2764	RNaseEG- ribonuclease, Rne/Rng family domain protein	annotation not available	0.795
WI67_12495	rlmH	DM42_2760	DM42_2762	RNaseEG- ribonuclease, Rne/Rng family domain protein	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.789
WI67_12495	rsfS	DM42_2760	DM42_2763	RNaseEG- ribonuclease, Rne/Rng family domain protein	Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	0.778
WL94_24445	WI67_12495	DM42_2761	DM42_2760	Maf-like protein WL94_24445; Maf- septum formation protein Maf	RNaseEG- ribonuclease, Rne/Rng family domain protein	0.905
WL94_24445	hemF	DM42_2761	DM42_2765	Maf-like protein WL94_24445; Maf- septum formation protein Maf	Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	0.658
WL94_24445	nadD	DM42_2761	DM42_2764	Maf-like protein WL94_24445; Maf- septum formation protein Maf	annotation not available	0.767
WL94_24445	rlmH	DM42_2761	DM42_2762	Maf-like protein WL94_24445; Maf- septum formation protein Maf	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.789
WL94_24445	rsfS	DM42_2761	DM42_2763	Maf-like protein WL94_24445; Maf- septum formation protein Maf	Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	0.817
gidB	prmA	DM42_1686	DM42_1238	Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA	Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11	0.747
gidB	rlmH	DM42_1686	DM42_2762	Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.694
gidB	rlmN	DM42_1686	DM42_3286	Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA	Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	0.613
hemF	WI67_12495	DM42_2765	DM42_2760	Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	RNaseEG- ribonuclease, Rne/Rng family domain protein	0.679
hemF	WL94_24445	DM42_2765	DM42_2761	Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	Maf-like protein WL94_24445; Maf- septum formation protein Maf	0.658
hemF	nadD	DM42_2765	DM42_2764	Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	annotation not available	0.773
hemF	rlmH	DM42_2765	DM42_2762	Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.723
hemF	rsfS	DM42_2765	DM42_2763	Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	0.774
mrdA	rlmH	DM42_1898	DM42_2762	Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.829
mrdA	rsfS	DM42_1898	DM42_2763	Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily	Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	0.474

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