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DM42_2868 protein (Burkholderia cepacia) - STRING interaction network
"DM42_2868" - tonB_Cterm: TonB family C-terminal domain protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2868tonB_Cterm- TonB family C-terminal domain protein (97 aa)    
Predicted Functional Partners:
WL94_39725
annotation not available (244 aa)
 
 
  0.935
WI67_11955
annotation not available (140 aa)
 
 
  0.917
DM42_4530
annotation not available (238 aa)
 
 
  0.723
WI67_09150
annotation not available (301 aa)
 
 
  0.699
DM42_6365
annotation not available (642 aa)
 
 
  0.692
WI67_03030
annotation not available (222 aa)
 
 
  0.688
WL94_34810
annotation not available (152 aa)
 
 
  0.669
tolQ
tolQ- protein TolQ (225 aa)
   
 
  0.642
WI67_09140
annotation not available (143 aa)
 
 
  0.641
DM42_4529
annotation not available (136 aa)
   
 
  0.622
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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