Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1724 | DM42_804 | DM42_1724 | DM42_804 | General secretion pathway protein GspJ; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | Hypothetical protein; Uncharacterized protein | 0.453 |
DM42_1724 | bfd | DM42_1724 | DM42_2869 | General secretion pathway protein GspJ; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | annotation not available | 0.524 |
DM42_1724 | hemP | DM42_1724 | DM42_2862 | General secretion pathway protein GspJ; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | annotation not available | 0.402 |
DM42_1724 | tolA | DM42_1724 | DM42_1028 | General secretion pathway protein GspJ; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | Colicin import membrane protein; tolA_full: protein TolA | 0.461 |
DM42_5762 | DM42_5765 | DM42_5762 | DM42_5765 | annotation not available | Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.999 |
DM42_5762 | bfd | DM42_5762 | DM42_2869 | annotation not available | annotation not available | 0.482 |
DM42_5762 | tolA | DM42_5762 | DM42_1028 | annotation not available | Colicin import membrane protein; tolA_full: protein TolA | 0.554 |
DM42_5765 | DM42_5762 | DM42_5765 | DM42_5762 | Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | annotation not available | 0.999 |
DM42_5765 | bfd | DM42_5765 | DM42_2869 | Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | annotation not available | 0.462 |
DM42_5765 | fhuF | DM42_5765 | DM42_57 | Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | Ferric iron reductase protein fhuf; Iron reductase; fe_III_red_FhuF: siderophore-iron reductase FhuF | 0.526 |
DM42_804 | DM42_1724 | DM42_804 | DM42_1724 | Hypothetical protein; Uncharacterized protein | General secretion pathway protein GspJ; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.453 |
DM42_804 | bfd | DM42_804 | DM42_2869 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.459 |
DM42_848 | bfd | DM42_848 | DM42_2869 | Periplasmic protein tonb; tonB_Cterm: TonB family C-terminal domain protein | annotation not available | 0.500 |
DM42_848 | hemP | DM42_848 | DM42_2862 | Periplasmic protein tonb; tonB_Cterm: TonB family C-terminal domain protein | annotation not available | 0.431 |
bfd | DM42_1724 | DM42_2869 | DM42_1724 | annotation not available | General secretion pathway protein GspJ; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.524 |
bfd | DM42_5762 | DM42_2869 | DM42_5762 | annotation not available | annotation not available | 0.482 |
bfd | DM42_5765 | DM42_2869 | DM42_5765 | annotation not available | Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.462 |
bfd | DM42_804 | DM42_2869 | DM42_804 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.459 |
bfd | DM42_848 | DM42_2869 | DM42_848 | annotation not available | Periplasmic protein tonb; tonB_Cterm: TonB family C-terminal domain protein | 0.500 |
bfd | bfr | DM42_2869 | DM42_2871 | annotation not available | Bacterioferritin; Iron-storage protein | 0.884 |
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