Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM42_2884 | DM42_2885 | Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein | Conserved hypothetical protein | 0.888 |
DM42_2884 | DM42_2886 | Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein | annotation not available | 0.420 |
DM42_2884 | DM42_2887 | Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein | annotation not available | 0.860 |
DM42_2885 | DM42_2884 | Conserved hypothetical protein | Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein | 0.888 |
DM42_2885 | DM42_2886 | Conserved hypothetical protein | annotation not available | 0.518 |
DM42_2885 | DM42_2887 | Conserved hypothetical protein | annotation not available | 0.648 |
DM42_2886 | DM42_2884 | annotation not available | Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein | 0.420 |
DM42_2886 | DM42_2885 | annotation not available | Conserved hypothetical protein | 0.518 |
DM42_2886 | DM42_2887 | annotation not available | annotation not available | 0.865 |
DM42_2886 | DM42_2888 | annotation not available | annotation not available | 0.432 |
DM42_2887 | DM42_2884 | annotation not available | Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein | 0.860 |
DM42_2887 | DM42_2885 | annotation not available | Conserved hypothetical protein | 0.648 |
DM42_2887 | DM42_2886 | annotation not available | annotation not available | 0.865 |
DM42_2887 | DM42_2888 | annotation not available | annotation not available | 0.534 |
DM42_2888 | DM42_2886 | annotation not available | annotation not available | 0.432 |
DM42_2888 | DM42_2887 | annotation not available | annotation not available | 0.534 |