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STRINGSTRING
DM42_2887 protein (Burkholderia cepacia) - STRING interaction network
"DM42_2887" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2887annotation not available (87 aa)    
Predicted Functional Partners:
DM42_2884
vgr_GE- Rhs element Vgr family protein (902 aa)
 
   
  0.855
DM42_2886
annotation not available (390 aa)
              0.850
WI67_02165
Type VI secretion protein ImpA; impA-related N-terminal family protein (373 aa)
 
     
  0.801
DM42_347
vgr_GE- Rhs element Vgr family protein (930 aa)
 
   
  0.793
DM42_350
vgr_GE- Rhs element Vgr family protein (1244 aa)
 
   
  0.791
WI67_02180
annotation not available (1314 aa)
 
   
  0.791
DM42_5030
vgr_GE- Rhs element Vgr family protein (948 aa)
 
   
  0.777
DM42_5104
vgr_GE- Rhs element Vgr family protein (834 aa)
 
   
  0.775
DM42_354
vgr_GE- Rhs element Vgr family protein (931 aa)
 
   
  0.773
WI67_02115
Type VI secretion protein (448 aa)
 
     
  0.772
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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