STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2890Hypothetical protein; Tellurium resistance protein; vWA found in TerF C terminus family protein (246 aa)    
Predicted Functional Partners:
yceD
annotation not available
     0.906
DM42_2889
annotation not available
 
     0.884
DM42_2891
annotation not available
 
     0.856
DM42_7390
annotation not available
 
  
 0.675
Methyltransferase
fkbM_fam: methyltransferase, FkbM family domain protein
  
    0.674
DM42_393
Conserved hypothetical protein
  
  
 0.664
DM42_5974
annotation not available
  
     0.592
DM42_4653
Conserved hypothetical protein
 
     0.554
DM42_6544
Conserved hypothetical protein
  
     0.547
DM42_1123
annotation not available
  
     0.529
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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