Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_4070 | DM42_796 | DM42_4070 | DM42_796 | annotation not available | annotation not available | 0.820 |
DM42_4070 | DM42_797 | DM42_4070 | DM42_797 | annotation not available | annotation not available | 0.816 |
DM42_4070 | fdh | DM42_4070 | DM42_7154 | annotation not available | Nad-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms | 0.806 |
DM42_4070 | fdnG | DM42_4070 | DM42_4069 | annotation not available | Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.999 |
DM42_4070 | fdoI | DM42_4070 | DM42_4067 | annotation not available | formate-DH-gamm: formate dehydrogenase, gamma subunit | 0.997 |
DM42_4070 | fdxH | DM42_4070 | DM42_4068 | annotation not available | Formate dehydrogenase iron-sulfur subunit; FDH-beta: formate dehydrogenase, beta subunit | 0.998 |
DM42_4070 | hutG | DM42_4070 | DM42_2921 | annotation not available | hutG_amidohyd: N-formylglutamate deformylase | 0.902 |
DM42_4070 | oxdD | DM42_4070 | DM42_6184 | annotation not available | annotation not available | 0.900 |
DM42_796 | DM42_4070 | DM42_796 | DM42_4070 | annotation not available | annotation not available | 0.820 |
DM42_796 | DM42_797 | DM42_796 | DM42_797 | annotation not available | annotation not available | 0.999 |
DM42_796 | fdh | DM42_796 | DM42_7154 | annotation not available | Nad-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms | 0.800 |
DM42_796 | fdnG | DM42_796 | DM42_4069 | annotation not available | Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.930 |
DM42_796 | fdoI | DM42_796 | DM42_4067 | annotation not available | formate-DH-gamm: formate dehydrogenase, gamma subunit | 0.803 |
DM42_796 | fdxH | DM42_796 | DM42_4068 | annotation not available | Formate dehydrogenase iron-sulfur subunit; FDH-beta: formate dehydrogenase, beta subunit | 0.813 |
DM42_796 | hutG | DM42_796 | DM42_2921 | annotation not available | hutG_amidohyd: N-formylglutamate deformylase | 0.900 |
DM42_796 | oxdD | DM42_796 | DM42_6184 | annotation not available | annotation not available | 0.900 |
DM42_797 | DM42_4070 | DM42_797 | DM42_4070 | annotation not available | annotation not available | 0.816 |
DM42_797 | DM42_796 | DM42_797 | DM42_796 | annotation not available | annotation not available | 0.999 |
DM42_797 | fdh | DM42_797 | DM42_7154 | annotation not available | Nad-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms | 0.811 |
DM42_797 | fdnG | DM42_797 | DM42_4069 | annotation not available | Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.930 |
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