WL94_32910 protein (Burkholderia cepacia) - STRING interaction network

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Score

WL94_32910

exoDNase_III- exodeoxyribonuclease III (258 aa)

Predicted Functional Partners:

WI67_16540

0.844

polA

0.761

ligD

0.751

murI

0.673

ribD

0.651

dnaN

0.630

nth

0.599

mutY

0.583

WI67_11925

0.537

WL94_32890

0.497

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WI67_11925	WI67_16540	DM42_2872	DM42_1906	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	exoDNase_III- exodeoxyribonuclease III	0.537
WI67_11925	WL94_32910	DM42_2872	DM42_2942	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	exoDNase_III- exodeoxyribonuclease III	0.537
WI67_11925	dnaN	DM42_2872	DM42_1785	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...]	0.535
WI67_11925	murI	DM42_2872	DM42_2870	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Glut_race- glutamate racemase	0.763
WI67_16540	WI67_11925	DM42_1906	DM42_2872	exoDNase_III- exodeoxyribonuclease III	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	0.537
WI67_16540	WL94_32910	DM42_1906	DM42_2942	exoDNase_III- exodeoxyribonuclease III	exoDNase_III- exodeoxyribonuclease III	0.844
WI67_16540	dnaN	DM42_1906	DM42_1785	exoDNase_III- exodeoxyribonuclease III	Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...]	0.630
WI67_16540	ligD	DM42_1906	DM42_7098	exoDNase_III- exodeoxyribonuclease III	NHEJ_ligase_prk- DNA ligase D	0.545
WI67_16540	mutY	DM42_1906	DM42_2273	exoDNase_III- exodeoxyribonuclease III	mutY- A/G-specific adenine glycosylase	0.641
WI67_16540	nth	DM42_1906	DM42_2731	exoDNase_III- exodeoxyribonuclease III	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate	0.830
WI67_16540	polA	DM42_1906	DM42_4183	exoDNase_III- exodeoxyribonuclease III	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.761
WI67_16540	ribD	DM42_1906	DM42_881	exoDNase_III- exodeoxyribonuclease III	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.651
WL94_32890	WL94_32910	DM42_2947	DM42_2942	annotation not available	exoDNase_III- exodeoxyribonuclease III	0.497
WL94_32910	WI67_11925	DM42_2942	DM42_2872	exoDNase_III- exodeoxyribonuclease III	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	0.537
WL94_32910	WI67_16540	DM42_2942	DM42_1906	exoDNase_III- exodeoxyribonuclease III	exoDNase_III- exodeoxyribonuclease III	0.844
WL94_32910	WL94_32890	DM42_2942	DM42_2947	exoDNase_III- exodeoxyribonuclease III	annotation not available	0.497
WL94_32910	dnaN	DM42_2942	DM42_1785	exoDNase_III- exodeoxyribonuclease III	Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...]	0.630
WL94_32910	ligD	DM42_2942	DM42_7098	exoDNase_III- exodeoxyribonuclease III	NHEJ_ligase_prk- DNA ligase D	0.751
WL94_32910	murI	DM42_2942	DM42_2870	exoDNase_III- exodeoxyribonuclease III	Glut_race- glutamate racemase	0.673
WL94_32910	mutY	DM42_2942	DM42_2273	exoDNase_III- exodeoxyribonuclease III	mutY- A/G-specific adenine glycosylase	0.583

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