Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1105 | DM42_1807 | DM42_1105 | DM42_1807 | annotation not available | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | 0.408 |
DM42_1105 | glcD | DM42_1105 | DM42_5171 | annotation not available | annotation not available | 0.805 |
DM42_1105 | lutA_2 | DM42_1105 | DM42_2957 | annotation not available | annotation not available | 0.485 |
DM42_1807 | DM42_1105 | DM42_1807 | DM42_1105 | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | annotation not available | 0.408 |
DM42_1807 | DM42_2318 | DM42_1807 | DM42_2318 | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | annotation not available | 0.657 |
DM42_1807 | DM42_2319 | DM42_1807 | DM42_2319 | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | L-lactate dehydrogenase complex protein lldg; Conserved hypothetical protein | 0.757 |
DM42_1807 | DM42_2958 | DM42_1807 | DM42_2958 | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | annotation not available | 0.661 |
DM42_1807 | DM42_724 | DM42_1807 | DM42_724 | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | L-lactate dehydrogenase complex protein lldg; Uncharacterized protein | 0.646 |
DM42_1807 | lutA_2 | DM42_1807 | DM42_2957 | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | annotation not available | 0.471 |
DM42_2318 | DM42_1807 | DM42_2318 | DM42_1807 | annotation not available | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | 0.657 |
DM42_2318 | DM42_2319 | DM42_2318 | DM42_2319 | annotation not available | L-lactate dehydrogenase complex protein lldg; Conserved hypothetical protein | 0.997 |
DM42_2318 | DM42_724 | DM42_2318 | DM42_724 | annotation not available | L-lactate dehydrogenase complex protein lldg; Uncharacterized protein | 0.979 |
DM42_2318 | lutA_2 | DM42_2318 | DM42_2957 | annotation not available | annotation not available | 0.985 |
DM42_2319 | DM42_1807 | DM42_2319 | DM42_1807 | L-lactate dehydrogenase complex protein lldg; Conserved hypothetical protein | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | 0.757 |
DM42_2319 | DM42_2318 | DM42_2319 | DM42_2318 | L-lactate dehydrogenase complex protein lldg; Conserved hypothetical protein | annotation not available | 0.997 |
DM42_2319 | DM42_2958 | DM42_2319 | DM42_2958 | L-lactate dehydrogenase complex protein lldg; Conserved hypothetical protein | annotation not available | 0.981 |
DM42_2319 | lutA_2 | DM42_2319 | DM42_2957 | L-lactate dehydrogenase complex protein lldg; Conserved hypothetical protein | annotation not available | 0.885 |
DM42_2956 | DM42_2958 | DM42_2956 | DM42_2958 | annotation not available | annotation not available | 0.514 |
DM42_2956 | lutA_2 | DM42_2956 | DM42_2957 | annotation not available | annotation not available | 0.599 |
DM42_2958 | DM42_1807 | DM42_2958 | DM42_1807 | annotation not available | Transporter, lactate permease family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate | 0.661 |
page 1 of 3