Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2959 | WI67_11520 | DM42_2959 | DM42_2960 | Conserved hypothetical protein | annotation not available | 0.570 |
DM42_3756 | WI67_11520 | DM42_3756 | DM42_2960 | annotation not available | annotation not available | 0.741 |
DM42_3756 | WL94_26945 | DM42_3756 | DM42_4227 | annotation not available | Eps_fam: capsular exopolysaccharide family domain protein | 0.458 |
DM42_3756 | ptp | DM42_3756 | DM42_4229 | annotation not available | annotation not available | 0.867 |
DM42_4737 | WI67_11520 | DM42_4737 | DM42_2960 | Conserved hypothetical protein | annotation not available | 0.507 |
DM42_4737 | ptp | DM42_4737 | DM42_4229 | Conserved hypothetical protein | annotation not available | 0.507 |
WI67_11510 | WI67_11520 | DM42_2962 | DM42_2960 | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily | annotation not available | 0.600 |
WI67_11510 | iscR | DM42_2962 | DM42_2961 | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily | iscR: iron-sulfur cluster assembly transcription factor IscR | 0.960 |
WI67_11510 | iscU | DM42_2962 | DM42_2963 | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters | 0.996 |
WI67_11520 | DM42_2959 | DM42_2960 | DM42_2959 | annotation not available | Conserved hypothetical protein | 0.570 |
WI67_11520 | DM42_3756 | DM42_2960 | DM42_3756 | annotation not available | annotation not available | 0.741 |
WI67_11520 | DM42_4737 | DM42_2960 | DM42_4737 | annotation not available | Conserved hypothetical protein | 0.507 |
WI67_11520 | WI67_11510 | DM42_2960 | DM42_2962 | annotation not available | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily | 0.600 |
WI67_11520 | WL94_04480 | DM42_2960 | DM42_2634 | annotation not available | Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP | 0.498 |
WI67_11520 | WL94_14045 | DM42_2960 | DM42_2271 | annotation not available | annotation not available | 0.468 |
WI67_11520 | WL94_26945 | DM42_2960 | DM42_4227 | annotation not available | Eps_fam: capsular exopolysaccharide family domain protein | 0.741 |
WI67_11520 | iscR | DM42_2960 | DM42_2961 | annotation not available | iscR: iron-sulfur cluster assembly transcription factor IscR | 0.712 |
WI67_11520 | iscU | DM42_2960 | DM42_2963 | annotation not available | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters | 0.489 |
WI67_11520 | ptp | DM42_2960 | DM42_4229 | annotation not available | annotation not available | 0.555 |
WL94_04480 | WI67_11520 | DM42_2634 | DM42_2960 | Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP | annotation not available | 0.498 |
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