node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2973 | DM42_2977 | DM42_2973 | DM42_2977 | Hypothetical protein; Regulator | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | 0.630 |
DM42_2973 | recJ | DM42_2973 | DM42_2972 | Hypothetical protein; Regulator | recJ: single-stranded-DNA-specific exonuclease RecJ | 0.887 |
DM42_2977 | DM42_2973 | DM42_2977 | DM42_2973 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | Hypothetical protein; Regulator | 0.630 |
DM42_2977 | lysS | DM42_2977 | DM42_2970 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | Lysyl-trna synthetase, class ii; Belongs to the class-II aminoacyl-tRNA synthetase family | 0.454 |
DM42_2977 | recG | DM42_2977 | DM42_1117 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.778 |
DM42_2977 | recJ | DM42_2977 | DM42_2972 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | recJ: single-stranded-DNA-specific exonuclease RecJ | 0.776 |
DM42_2977 | recN | DM42_2977 | DM42_1094 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | Dna repair protein recn (recombination protein n); May be involved in recombinational repair of damaged DNA | 0.408 |
DM42_2977 | recQ | DM42_2977 | DM42_1479 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | recQ: ATP-dependent DNA helicase RecQ | 0.725 |
DM42_2977 | ruvA | DM42_2977 | DM42_1153 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB | 0.676 |
DM42_2977 | ruvB | DM42_2977 | DM42_1154 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.847 |
lysS | DM42_2977 | DM42_2970 | DM42_2977 | Lysyl-trna synthetase, class ii; Belongs to the class-II aminoacyl-tRNA synthetase family | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | 0.454 |
lysS | recJ | DM42_2970 | DM42_2972 | Lysyl-trna synthetase, class ii; Belongs to the class-II aminoacyl-tRNA synthetase family | recJ: single-stranded-DNA-specific exonuclease RecJ | 0.786 |
mpl | mutL | DM42_1232 | DM42_1072 | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.445 |
mpl | recG | DM42_1232 | DM42_1117 | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.498 |
mpl | recJ | DM42_1232 | DM42_2972 | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | recJ: single-stranded-DNA-specific exonuclease RecJ | 0.801 |
mpl | recN | DM42_1232 | DM42_1094 | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | Dna repair protein recn (recombination protein n); May be involved in recombinational repair of damaged DNA | 0.554 |
mpl | ruvA | DM42_1232 | DM42_1153 | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB | 0.560 |
mutL | mpl | DM42_1072 | DM42_1232 | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | 0.445 |
mutL | recG | DM42_1072 | DM42_1117 | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.526 |
mutL | recJ | DM42_1072 | DM42_2972 | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | recJ: single-stranded-DNA-specific exonuclease RecJ | 0.868 |