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STRINGSTRING
DM42_3022 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3022" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3022annotation not available (224 aa)    
Predicted Functional Partners:
DM42_3023
annotation not available (463 aa)
 
 
  0.968
DM42_3024
Transcriptional regulatory , C terminal family protein (221 aa)
 
       
0.830
WL94_27110
annotation not available (769 aa)
 
 
  0.654
WI67_21125
annotation not available (363 aa)
 
 
  0.652
DM42_3670
cztS_silS_copS- heavy metal sensor kinase family protein (494 aa)
 
  0.650
WL94_01425
Sensor protein; Member of a two-component regulatory system (469 aa)
 
 
  0.634
DM42_6244
annotation not available (643 aa)
 
 
  0.627
DM42_1572
annotation not available (751 aa)
   
 
  0.624
DM42_7273
cztS_silS_copS- heavy metal sensor kinase family protein (486 aa)
 
 
  0.612
DM42_7146
annotation not available (530 aa)
 
 
  0.598
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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