Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
loading ...
currently showing
Fusion
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_10850
annotation not available (406 aa)
Predicted Functional Partners:
WL94_30945
annotation not available
0.960
WL94_30955
Thioredoxin
0.894
DM42_3106
Conserved hypothetical protein
0.637
DM42_1572
annotation not available
0.624
WL94_08570
annotation not available
0.569
WL94_27110
annotation not available
0.567
DM42_7128
annotation not available
0.514
DM42_4126
Domain of unknown function family protein
0.505
WL94_30940
annotation not available
0.486
cheZ
Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1
node2
node1 accession
node2 accession
node1 annotation
node2 annotation
score
DM42_1572
DM42_7128
DM42_1572
DM42_7128
annotation not available
annotation not available
0.786
DM42_1572
WI67_10850
DM42_1572
DM42_3104
annotation not available
annotation not available
0.624
DM42_1572
WL94_08570
DM42_1572
DM42_3896
annotation not available
annotation not available
0.698
DM42_1572
WL94_27110
DM42_1572
DM42_4261
annotation not available
annotation not available
0.759
DM42_1572
cheZ
DM42_1572
DM42_1565
annotation not available
Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
0.999
DM42_3106
WI67_10850
DM42_3106
DM42_3104
Conserved hypothetical protein
annotation not available
0.637
DM42_3106
WL94_30945
DM42_3106
DM42_3103
Conserved hypothetical protein
annotation not available
0.600
DM42_3106
WL94_30955
DM42_3106
DM42_3105
Conserved hypothetical protein
Thioredoxin
0.840
DM42_4126
WI67_10850
DM42_4126
DM42_3104
Domain of unknown function family protein
annotation not available
0.505
DM42_4126
WL94_30945
DM42_4126
DM42_3103
Domain of unknown function family protein
annotation not available
0.525
DM42_4126
WL94_30955
DM42_4126
DM42_3105
Domain of unknown function family protein
Thioredoxin
0.460
DM42_7128
DM42_1572
DM42_7128
DM42_1572
annotation not available
annotation not available
0.786
DM42_7128
WI67_10850
DM42_7128
DM42_3104
annotation not available
annotation not available
0.514
DM42_7128
WL94_27110
DM42_7128
DM42_4261
annotation not available
annotation not available
0.787
WI67_10850
DM42_1572
DM42_3104
DM42_1572
annotation not available
annotation not available
0.624
WI67_10850
DM42_3106
DM42_3104
DM42_3106
annotation not available
Conserved hypothetical protein
0.637
WI67_10850
DM42_4126
DM42_3104
DM42_4126
annotation not available
Domain of unknown function family protein
0.505
WI67_10850
DM42_7128
DM42_3104
DM42_7128
annotation not available
annotation not available
0.514
WI67_10850
WL94_08570
DM42_3104
DM42_3896
annotation not available
annotation not available
0.569
WI67_10850
WL94_27110
DM42_3104
DM42_4261
annotation not available
annotation not available
0.567
page 1 of 3
Network Stats
Network Stats analysis is still ongoing, please wait ...
Functional enrichments in your networkNote: some enrichments may be expected here (why?) explain columns
Enrichment analysis is still ongoing, please wait ...
Statistical background
For the above enrichment analysis, the following statistical background is assumed: