Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Alc | DM42_3128 | DM42_3132 | DM42_3128 | Belongs to the allantoicase family | annotation not available | 0.435 |
Alc | DM42_3129 | DM42_3132 | DM42_3129 | Belongs to the allantoicase family | annotation not available | 0.469 |
Alc | DM42_3133 | DM42_3132 | DM42_3133 | Belongs to the allantoicase family | Ureidoglycolate hydrolase family protein; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source | 0.997 |
Alc | puuE | DM42_3132 | DM42_3130 | Belongs to the allantoicase family | annotation not available | 0.978 |
Alc | uraD | DM42_3132 | DM42_3131 | Belongs to the allantoicase family | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; UHCUDC: OHCU decarboxylase | 0.799 |
DM42_3127 | DM42_3128 | DM42_3127 | DM42_3128 | annotation not available | annotation not available | 0.546 |
DM42_3127 | DM42_3129 | DM42_3127 | DM42_3129 | annotation not available | annotation not available | 0.656 |
DM42_3127 | DM42_3133 | DM42_3127 | DM42_3133 | annotation not available | Ureidoglycolate hydrolase family protein; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source | 0.420 |
DM42_3127 | puuE | DM42_3127 | DM42_3130 | annotation not available | annotation not available | 0.573 |
DM42_3127 | uraD | DM42_3127 | DM42_3131 | annotation not available | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; UHCUDC: OHCU decarboxylase | 0.572 |
DM42_3128 | Alc | DM42_3128 | DM42_3132 | annotation not available | Belongs to the allantoicase family | 0.435 |
DM42_3128 | DM42_3127 | DM42_3128 | DM42_3127 | annotation not available | annotation not available | 0.546 |
DM42_3128 | DM42_3129 | DM42_3128 | DM42_3129 | annotation not available | annotation not available | 0.965 |
DM42_3128 | DM42_3133 | DM42_3128 | DM42_3133 | annotation not available | Ureidoglycolate hydrolase family protein; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source | 0.438 |
DM42_3128 | DM42_3957 | DM42_3128 | DM42_3957 | annotation not available | annotation not available | 0.776 |
DM42_3128 | hydA | DM42_3128 | DM42_7357 | annotation not available | D-hydantoinase: dihydropyrimidinase | 0.511 |
DM42_3128 | puuE | DM42_3128 | DM42_3130 | annotation not available | annotation not available | 0.640 |
DM42_3128 | uraD | DM42_3128 | DM42_3131 | annotation not available | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; UHCUDC: OHCU decarboxylase | 0.602 |
DM42_3129 | Alc | DM42_3129 | DM42_3132 | annotation not available | Belongs to the allantoicase family | 0.469 |
DM42_3129 | DM42_3127 | DM42_3129 | DM42_3127 | annotation not available | annotation not available | 0.656 |
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